Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Best1O88870 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Best1O88870 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Best1O88870 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Best1O88870 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Best1O88870 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Best1O88870 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.93■□□□□ 0.46
Best1O88870 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Best1O88870 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.93■□□□□ 0.46
Best1O88870 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.92■□□□□ 0.46
Best1O88870 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Best1O88870 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Best1O88870 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Best1O88870 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Best1O88870 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
Best1O88870 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Best1O88870 Notumos-201ENSMUST00000151998 2659 ntBASIC17.91■□□□□ 0.46
Best1O88870 Gm2399-201ENSMUST00000104944 225 ntBASIC17.91■□□□□ 0.46
Best1O88870 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.91■□□□□ 0.46
Best1O88870 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.91■□□□□ 0.46
Best1O88870 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Best1O88870 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Best1O88870 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Best1O88870 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Best1O88870 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.9■□□□□ 0.46
Best1O88870 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.9■□□□□ 0.46
Best1O88870 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.9■□□□□ 0.46
Best1O88870 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Best1O88870 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Best1O88870 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.89■□□□□ 0.46
Best1O88870 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Best1O88870 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Best1O88870 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Best1O88870 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Best1O88870 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.89■□□□□ 0.45
Best1O88870 Gm13168-201ENSMUST00000121771 632 ntBASIC17.89■□□□□ 0.45
Best1O88870 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Best1O88870 Gm22240-201ENSMUST00000175225 82 ntBASIC17.89■□□□□ 0.45
Best1O88870 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.89■□□□□ 0.45
Best1O88870 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Best1O88870 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Best1O88870 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Best1O88870 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Best1O88870 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Best1O88870 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.88■□□□□ 0.45
Best1O88870 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.88■□□□□ 0.45
Best1O88870 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Gm27275-201ENSMUST00000184318 272 ntBASIC17.88■□□□□ 0.45
Best1O88870 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.88■□□□□ 0.45
Best1O88870 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.88■□□□□ 0.45
Best1O88870 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.88■□□□□ 0.45
Best1O88870 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.88■□□□□ 0.45
Best1O88870 Flg-201ENSMUST00000050758 1488 ntBASIC17.88■□□□□ 0.45
Best1O88870 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Best1O88870 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms