Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a2O88627 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc28a2O88627 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc28a2O88627 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Slc28a2O88627 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Slc28a2O88627 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Slc28a2O88627 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc28a2O88627 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Slc28a2O88627 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc28a2O88627 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Slc28a2O88627 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Slc28a2O88627 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc28a2O88627 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Slc28a2O88627 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Slc28a2O88627 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.49■□□□□ 0.23
Slc28a2O88627 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.49■□□□□ 0.23
Slc28a2O88627 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.49■□□□□ 0.23
Slc28a2O88627 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Slc28a2O88627 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Slc28a2O88627 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Slc28a2O88627 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc28a2O88627 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Slc28a2O88627 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Slc28a2O88627 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Slc28a2O88627 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc28a2O88627 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.48■□□□□ 0.23
Slc28a2O88627 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Slc28a2O88627 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.48■□□□□ 0.23
Slc28a2O88627 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc28a2O88627 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc28a2O88627 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Slc28a2O88627 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc28a2O88627 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.47■□□□□ 0.23
Slc28a2O88627 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc28a2O88627 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc28a2O88627 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc28a2O88627 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.47■□□□□ 0.23
Slc28a2O88627 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.47■□□□□ 0.23
Slc28a2O88627 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Slc28a2O88627 Gm26833-201ENSMUST00000180899 440 ntBASIC16.47■□□□□ 0.23
Slc28a2O88627 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Slc28a2O88627 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Slc28a2O88627 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc28a2O88627 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc28a2O88627 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Slc28a2O88627 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.46■□□□□ 0.23
Slc28a2O88627 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.46■□□□□ 0.23
Slc28a2O88627 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Slc28a2O88627 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.46■□□□□ 0.23
Slc28a2O88627 Gm43017-201ENSMUST00000198296 752 ntBASIC16.46■□□□□ 0.23
Slc28a2O88627 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc28a2O88627 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc28a2O88627 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc28a2O88627 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc28a2O88627 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc28a2O88627 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc28a2O88627 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms