Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20bO88575 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20bO88575 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Slc6a20bO88575 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20bO88575 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20bO88575 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Slc6a20bO88575 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Slc6a20bO88575 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a20bO88575 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.39■□□□□ 0.85
Slc6a20bO88575 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20bO88575 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Gm7889-201ENSMUST00000185591 958 ntBASIC20.38■□□□□ 0.85
Slc6a20bO88575 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.38■□□□□ 0.85
Slc6a20bO88575 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20bO88575 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a20bO88575 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Slc6a20bO88575 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slc6a20bO88575 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a20bO88575 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a20bO88575 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Slc6a20bO88575 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.36■□□□□ 0.85
Slc6a20bO88575 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc6a20bO88575 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.36■□□□□ 0.85
Slc6a20bO88575 Gm27741-201ENSMUST00000185060 237 ntBASIC20.36■□□□□ 0.85
Slc6a20bO88575 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20bO88575 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20bO88575 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.34■□□□□ 0.85
Slc6a20bO88575 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20bO88575 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms