Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.73■□□□□ 0.43
Tgfbr3O88393 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.73■□□□□ 0.43
Tgfbr3O88393 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfbr3O88393 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tgfbr3O88393 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Gm11927-201ENSMUST00000118472 759 ntBASIC17.7■□□□□ 0.42
Tgfbr3O88393 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr3O88393 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tgfbr3O88393 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.7■□□□□ 0.42
Tgfbr3O88393 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.7■□□□□ 0.42
Tgfbr3O88393 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfbr3O88393 Flg-201ENSMUST00000050758 1488 ntBASIC17.69■□□□□ 0.42
Tgfbr3O88393 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr3O88393 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.69■□□□□ 0.42
Tgfbr3O88393 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Tgfbr3O88393 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.68■□□□□ 0.42
Tgfbr3O88393 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfbr3O88393 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.67■□□□□ 0.42
Tgfbr3O88393 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.67■□□□□ 0.42
Tgfbr3O88393 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.67■□□□□ 0.42
Tgfbr3O88393 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfbr3O88393 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms