Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.67■□□□□ 0.9
Atp9aO70228 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp9aO70228 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp9aO70228 Gm22240-201ENSMUST00000175225 82 ntBASIC20.67■□□□□ 0.9
Atp9aO70228 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.67■□□□□ 0.9
Atp9aO70228 Gm44549-201ENSMUST00000208351 577 ntBASIC20.67■□□□□ 0.9
Atp9aO70228 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.67■□□□□ 0.9
Atp9aO70228 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atp9aO70228 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Atp9aO70228 Gm13168-201ENSMUST00000121771 632 ntBASIC20.66■□□□□ 0.9
Atp9aO70228 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Atp9aO70228 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.66■□□□□ 0.9
Atp9aO70228 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Atp9aO70228 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp9aO70228 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp9aO70228 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atp9aO70228 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atp9aO70228 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp9aO70228 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp9aO70228 Gm8520-201ENSMUST00000186517 868 ntBASIC20.65■□□□□ 0.9
Atp9aO70228 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.65■□□□□ 0.9
Atp9aO70228 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Atp9aO70228 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Atp9aO70228 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp9aO70228 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp9aO70228 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.64■□□□□ 0.9
Atp9aO70228 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.64■□□□□ 0.89
Atp9aO70228 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atp9aO70228 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Atp9aO70228 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.64■□□□□ 0.89
Atp9aO70228 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Atp9aO70228 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atp9aO70228 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Dio3-201ENSMUST00000097228 1449 ntBASIC20.63■□□□□ 0.89
Atp9aO70228 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.63■□□□□ 0.89
Atp9aO70228 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Gm2559-201ENSMUST00000201323 363 ntBASIC20.63■□□□□ 0.89
Atp9aO70228 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atp9aO70228 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp9aO70228 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp9aO70228 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp9aO70228 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.62■□□□□ 0.89
Atp9aO70228 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Atp9aO70228 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp9aO70228 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Atp9aO70228 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atp9aO70228 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atp9aO70228 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp9aO70228 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Atp9aO70228 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.61■□□□□ 0.89
Atp9aO70228 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.61■□□□□ 0.89
Atp9aO70228 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atp9aO70228 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Atp9aO70228 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Atp9aO70228 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp9aO70228 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Atp9aO70228 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp9aO70228 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp9aO70228 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp9aO70228 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.59■□□□□ 0.89
Atp9aO70228 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Atp9aO70228 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp9aO70228 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp9aO70228 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp9aO70228 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atp9aO70228 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms