Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cntnap1O54991 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Cntnap1O54991 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cntnap1O54991 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cntnap1O54991 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC24.35■■□□□ 1.49
Cntnap1O54991 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cntnap1O54991 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cntnap1O54991 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cntnap1O54991 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cntnap1O54991 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cntnap1O54991 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC24.34■■□□□ 1.49
Cntnap1O54991 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Cntnap1O54991 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Cntnap1O54991 AC166341.7-201ENSMUST00000221698 126 ntBASIC24.34■■□□□ 1.49
Cntnap1O54991 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cntnap1O54991 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Cntnap1O54991 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cntnap1O54991 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Cntnap1O54991 Gm18958-201ENSMUST00000174258 762 ntBASIC24.33■■□□□ 1.49
Cntnap1O54991 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC24.33■■□□□ 1.49
Cntnap1O54991 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC24.33■■□□□ 1.49
Cntnap1O54991 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Cntnap1O54991 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Cntnap1O54991 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cntnap1O54991 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC24.33■■□□□ 1.48
Cntnap1O54991 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cntnap1O54991 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Cntnap1O54991 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cntnap1O54991 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
Cntnap1O54991 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC24.32■■□□□ 1.48
Cntnap1O54991 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC24.32■■□□□ 1.48
Cntnap1O54991 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cntnap1O54991 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cntnap1O54991 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.31■■□□□ 1.48
Cntnap1O54991 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cntnap1O54991 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC24.31■■□□□ 1.48
Cntnap1O54991 Gm29518-201ENSMUST00000190858 372 ntBASIC24.31■■□□□ 1.48
Cntnap1O54991 Gm5587-201ENSMUST00000206270 674 ntBASIC24.31■■□□□ 1.48
Cntnap1O54991 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC24.31■■□□□ 1.48
Cntnap1O54991 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cntnap1O54991 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cntnap1O54991 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.3■■□□□ 1.48
Cntnap1O54991 Gm24589-201ENSMUST00000116692 94 ntBASIC24.3■■□□□ 1.48
Cntnap1O54991 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cntnap1O54991 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cntnap1O54991 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Cntnap1O54991 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cntnap1O54991 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC24.3■■□□□ 1.48
Cntnap1O54991 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Cntnap1O54991 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.29■■□□□ 1.48
Cntnap1O54991 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cntnap1O54991 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cntnap1O54991 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cntnap1O54991 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC24.29■■□□□ 1.48
Cntnap1O54991 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cntnap1O54991 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cntnap1O54991 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cntnap1O54991 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC24.29■■□□□ 1.48
Cntnap1O54991 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cntnap1O54991 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cntnap1O54991 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cntnap1O54991 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Cntnap1O54991 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cntnap1O54991 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC24.28■■□□□ 1.48
Cntnap1O54991 Gm12085-201ENSMUST00000119263 940 ntBASIC24.28■■□□□ 1.48
Cntnap1O54991 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cntnap1O54991 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cntnap1O54991 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Mir6349-201ENSMUST00000184059 97 ntBASIC24.27■■□□□ 1.48
Cntnap1O54991 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC24.27■■□□□ 1.48
Cntnap1O54991 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cntnap1O54991 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cntnap1O54991 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cntnap1O54991 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms