Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.92■□□□□ 0.62
Banf1O54962 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Banf1O54962 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Banf1O54962 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Banf1O54962 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Banf1O54962 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Banf1O54962 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Banf1O54962 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Banf1O54962 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Banf1O54962 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Banf1O54962 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Banf1O54962 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Banf1O54962 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Banf1O54962 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.91■□□□□ 0.62
Banf1O54962 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Banf1O54962 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.9■□□□□ 0.62
Banf1O54962 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Gm38205-201ENSMUST00000192243 258 ntBASIC18.9■□□□□ 0.62
Banf1O54962 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Banf1O54962 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Banf1O54962 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Banf1O54962 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.89■□□□□ 0.61
Banf1O54962 Gm43017-201ENSMUST00000198296 752 ntBASIC18.89■□□□□ 0.61
Banf1O54962 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.89■□□□□ 0.61
Banf1O54962 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Banf1O54962 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Banf1O54962 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.88■□□□□ 0.61
Banf1O54962 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.88■□□□□ 0.61
Banf1O54962 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.88■□□□□ 0.61
Banf1O54962 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Banf1O54962 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.87■□□□□ 0.61
Banf1O54962 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Gm12821-201ENSMUST00000120022 600 ntBASIC18.87■□□□□ 0.61
Banf1O54962 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.87■□□□□ 0.61
Banf1O54962 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Banf1O54962 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Banf1O54962 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Banf1O54962 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Banf1O54962 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Banf1O54962 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Banf1O54962 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Banf1O54962 Gm26833-201ENSMUST00000180899 440 ntBASIC18.86■□□□□ 0.61
Banf1O54962 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Banf1O54962 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Banf1O54962 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Banf1O54962 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Banf1O54962 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Fst-202ENSMUST00000223640 2612 ntBASIC18.85■□□□□ 0.61
Banf1O54962 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Banf1O54962 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms