Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn5O54942 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cldn5O54942 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn5O54942 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn5O54942 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn5O54942 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn5O54942 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.35■□□□□ 0.69
Cldn5O54942 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.35■□□□□ 0.69
Cldn5O54942 Gm20049-201ENSMUST00000219950 730 ntBASIC19.35■□□□□ 0.69
Cldn5O54942 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cldn5O54942 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn5O54942 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn5O54942 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn5O54942 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn5O54942 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn5O54942 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn5O54942 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.34■□□□□ 0.69
Cldn5O54942 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn5O54942 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn5O54942 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn5O54942 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn5O54942 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn5O54942 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn5O54942 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn5O54942 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn5O54942 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn5O54942 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn5O54942 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn5O54942 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.33■□□□□ 0.68
Cldn5O54942 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cldn5O54942 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.33■□□□□ 0.68
Cldn5O54942 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.33■□□□□ 0.68
Cldn5O54942 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn5O54942 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn5O54942 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn5O54942 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn5O54942 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn5O54942 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldn5O54942 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn5O54942 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn5O54942 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn5O54942 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.32■□□□□ 0.68
Cldn5O54942 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn5O54942 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cldn5O54942 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cldn5O54942 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cldn5O54942 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.31■□□□□ 0.68
Cldn5O54942 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.31■□□□□ 0.68
Cldn5O54942 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn5O54942 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn5O54942 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn5O54942 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cldn5O54942 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cldn5O54942 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn5O54942 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
Cldn5O54942 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn5O54942 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.3■□□□□ 0.68
Cldn5O54942 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn5O54942 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.3■□□□□ 0.68
Cldn5O54942 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn5O54942 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn5O54942 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn5O54942 BC021767-201ENSMUST00000126387 1716 ntBASIC19.29■□□□□ 0.68
Cldn5O54942 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cldn5O54942 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cldn5O54942 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn5O54942 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn5O54942 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cldn5O54942 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cldn5O54942 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.28■□□□□ 0.68
Cldn5O54942 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn5O54942 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms