Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.9■□□□□ 0.62
Limk2O54785 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.9■□□□□ 0.62
Limk2O54785 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Limk2O54785 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Limk2O54785 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.89■□□□□ 0.62
Limk2O54785 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Limk2O54785 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Limk2O54785 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Limk2O54785 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk2O54785 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.89■□□□□ 0.61
Limk2O54785 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.89■□□□□ 0.61
Limk2O54785 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.89■□□□□ 0.61
Limk2O54785 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk2O54785 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk2O54785 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Limk2O54785 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk2O54785 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk2O54785 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.89■□□□□ 0.61
Limk2O54785 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Limk2O54785 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Golph3-205ENSMUST00000228671 2842 ntBASIC18.88■□□□□ 0.61
Limk2O54785 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Gm7290-201ENSMUST00000104990 617 ntBASIC18.88■□□□□ 0.61
Limk2O54785 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.88■□□□□ 0.61
Limk2O54785 Gm12918-201ENSMUST00000120234 636 ntBASIC18.88■□□□□ 0.61
Limk2O54785 Gm15710-201ENSMUST00000121821 636 ntBASIC18.88■□□□□ 0.61
Limk2O54785 Gm5075-201ENSMUST00000196916 622 ntBASIC18.88■□□□□ 0.61
Limk2O54785 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.88■□□□□ 0.61
Limk2O54785 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.88■□□□□ 0.61
Limk2O54785 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.88■□□□□ 0.61
Limk2O54785 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk2O54785 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Limk2O54785 Gm22240-201ENSMUST00000175225 82 ntBASIC18.87■□□□□ 0.61
Limk2O54785 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.87■□□□□ 0.61
Limk2O54785 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Limk2O54785 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Limk2O54785 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Limk2O54785 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Limk2O54785 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk2O54785 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk2O54785 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Limk2O54785 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Limk2O54785 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Limk2O54785 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Limk2O54785 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.86■□□□□ 0.61
Limk2O54785 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.86■□□□□ 0.61
Limk2O54785 Gm6420-201ENSMUST00000193885 723 ntBASIC18.86■□□□□ 0.61
Limk2O54785 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk2O54785 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk2O54785 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk2O54785 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk2O54785 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Limk2O54785 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Limk2O54785 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.85■□□□□ 0.61
Limk2O54785 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Limk2O54785 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Limk2O54785 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk2O54785 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.85■□□□□ 0.61
Limk2O54785 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.85■□□□□ 0.61
Limk2O54785 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms