Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Per1O35973 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Per1O35973 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Per1O35973 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Per1O35973 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Per1O35973 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per1O35973 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per1O35973 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per1O35973 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.29■□□□□ 0.84
Per1O35973 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per1O35973 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.29■□□□□ 0.84
Per1O35973 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.29■□□□□ 0.84
Per1O35973 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.29■□□□□ 0.84
Per1O35973 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per1O35973 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per1O35973 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per1O35973 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.29■□□□□ 0.84
Per1O35973 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Per1O35973 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Per1O35973 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Per1O35973 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.28■□□□□ 0.84
Per1O35973 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per1O35973 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per1O35973 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Per1O35973 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Per1O35973 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per1O35973 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per1O35973 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per1O35973 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Per1O35973 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per1O35973 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per1O35973 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.27■□□□□ 0.84
Per1O35973 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per1O35973 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.27■□□□□ 0.84
Per1O35973 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per1O35973 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per1O35973 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per1O35973 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Per1O35973 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Per1O35973 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Per1O35973 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Per1O35973 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.27■□□□□ 0.83
Per1O35973 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.26■□□□□ 0.83
Per1O35973 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.26■□□□□ 0.83
Per1O35973 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Per1O35973 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per1O35973 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Per1O35973 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per1O35973 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per1O35973 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per1O35973 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Per1O35973 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Per1O35973 Gm27011-201ENSMUST00000182352 972 ntBASIC20.25■□□□□ 0.83
Per1O35973 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.25■□□□□ 0.83
Per1O35973 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.25■□□□□ 0.83
Per1O35973 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per1O35973 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.25■□□□□ 0.83
Per1O35973 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per1O35973 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.24■□□□□ 0.83
Per1O35973 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.24■□□□□ 0.83
Per1O35973 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Per1O35973 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.24■□□□□ 0.83
Per1O35973 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Dio3-201ENSMUST00000097228 1449 ntBASIC20.24■□□□□ 0.83
Per1O35973 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Per1O35973 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Per1O35973 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per1O35973 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.22■□□□□ 0.83
Per1O35973 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Per1O35973 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.22■□□□□ 0.83
Per1O35973 Gm10653-202ENSMUST00000139570 835 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms