Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk2O35491 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk2O35491 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk2O35491 Gm27275-201ENSMUST00000184318 272 ntBASIC20.3■□□□□ 0.84
Clk2O35491 Gm8520-201ENSMUST00000186517 868 ntBASIC20.3■□□□□ 0.84
Clk2O35491 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.3■□□□□ 0.84
Clk2O35491 Gm2559-201ENSMUST00000201323 363 ntBASIC20.3■□□□□ 0.84
Clk2O35491 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.3■□□□□ 0.84
Clk2O35491 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk2O35491 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Clk2O35491 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clk2O35491 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk2O35491 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk2O35491 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.29■□□□□ 0.84
Clk2O35491 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Clk2O35491 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Clk2O35491 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk2O35491 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clk2O35491 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clk2O35491 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clk2O35491 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clk2O35491 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clk2O35491 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.28■□□□□ 0.84
Clk2O35491 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clk2O35491 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.27■□□□□ 0.84
Clk2O35491 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk2O35491 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Clk2O35491 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk2O35491 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.27■□□□□ 0.84
Clk2O35491 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.27■□□□□ 0.84
Clk2O35491 Gm22240-201ENSMUST00000175225 82 ntBASIC20.27■□□□□ 0.84
Clk2O35491 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.27■□□□□ 0.84
Clk2O35491 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk2O35491 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Clk2O35491 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clk2O35491 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Clk2O35491 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.27■□□□□ 0.83
Clk2O35491 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clk2O35491 Gm13168-201ENSMUST00000121771 632 ntBASIC20.26■□□□□ 0.83
Clk2O35491 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.26■□□□□ 0.83
Clk2O35491 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clk2O35491 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clk2O35491 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Clk2O35491 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.25■□□□□ 0.83
Clk2O35491 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Clk2O35491 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clk2O35491 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Clk2O35491 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Clk2O35491 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Clk2O35491 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk2O35491 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk2O35491 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clk2O35491 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk2O35491 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk2O35491 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk2O35491 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clk2O35491 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.24■□□□□ 0.83
Clk2O35491 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.23■□□□□ 0.83
Clk2O35491 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clk2O35491 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk2O35491 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk2O35491 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Clk2O35491 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.22■□□□□ 0.83
Clk2O35491 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.22■□□□□ 0.83
Clk2O35491 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clk2O35491 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.22■□□□□ 0.83
Clk2O35491 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.22■□□□□ 0.83
Clk2O35491 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Clk2O35491 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk2O35491 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clk2O35491 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms