Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Clcn6O35454 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clcn6O35454 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.59■□□□□ 0.73
Clcn6O35454 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Clcn6O35454 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn6O35454 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn6O35454 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.58■□□□□ 0.73
Clcn6O35454 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.58■□□□□ 0.73
Clcn6O35454 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn6O35454 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Clcn6O35454 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn6O35454 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn6O35454 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.58■□□□□ 0.72
Clcn6O35454 Gm44387-201ENSMUST00000196298 145 ntBASIC19.58■□□□□ 0.72
Clcn6O35454 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC19.58■□□□□ 0.72
Clcn6O35454 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.58■□□□□ 0.72
Clcn6O35454 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.58■□□□□ 0.72
Clcn6O35454 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn6O35454 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn6O35454 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn6O35454 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Clcn6O35454 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn6O35454 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clcn6O35454 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn6O35454 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.56■□□□□ 0.72
Clcn6O35454 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Clcn6O35454 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.56■□□□□ 0.72
Clcn6O35454 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Gm12251-201ENSMUST00000117893 792 ntBASIC19.56■□□□□ 0.72
Clcn6O35454 AC154828.2-201ENSMUST00000220908 1070 ntBASIC19.56■□□□□ 0.72
Clcn6O35454 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn6O35454 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clcn6O35454 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 Gm43908-201ENSMUST00000205074 1472 ntBASIC19.55■□□□□ 0.72
Clcn6O35454 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC19.55■□□□□ 0.72
Clcn6O35454 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.55■□□□□ 0.72
Clcn6O35454 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Clcn6O35454 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.55■□□□□ 0.72
Clcn6O35454 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Clcn6O35454 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn6O35454 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Clcn6O35454 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.54■□□□□ 0.72
Clcn6O35454 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Clcn6O35454 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Serp2-204ENSMUST00000228055 705 ntBASIC19.54■□□□□ 0.72
Clcn6O35454 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Clcn6O35454 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Clcn6O35454 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.54■□□□□ 0.72
Clcn6O35454 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.54■□□□□ 0.72
Clcn6O35454 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Clcn6O35454 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn6O35454 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clcn6O35454 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clcn6O35454 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.53■□□□□ 0.72
Clcn6O35454 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn6O35454 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.53■□□□□ 0.72
Clcn6O35454 Gm28925-201ENSMUST00000188586 168 ntBASIC19.53■□□□□ 0.72
Clcn6O35454 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn6O35454 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn6O35454 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn6O35454 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Clcn6O35454 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn6O35454 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms