Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf11aO35305 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.11■□□□□ 0.81
Tnfrsf11aO35305 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tnfrsf11aO35305 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf11aO35305 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf11aO35305 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Gm37179-201ENSMUST00000194862 823 ntBASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf11aO35305 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Tnfrsf11aO35305 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11aO35305 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.09■□□□□ 0.81
Tnfrsf11aO35305 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.09■□□□□ 0.81
Tnfrsf11aO35305 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11aO35305 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf11aO35305 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Tnfrsf11aO35305 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf11aO35305 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.08■□□□□ 0.81
Tnfrsf11aO35305 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.08■□□□□ 0.81
Tnfrsf11aO35305 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
Tnfrsf11aO35305 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf11aO35305 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfrsf11aO35305 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf11aO35305 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Tnfrsf11aO35305 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf11aO35305 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Gm6365-201ENSMUST00000054711 744 ntBASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf11aO35305 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf11aO35305 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms