Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx4O35137 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Alx4O35137 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.57■□□□□ 0.24
Alx4O35137 Gm43137-201ENSMUST00000198052 594 ntBASIC16.57■□□□□ 0.24
Alx4O35137 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Alx4O35137 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx4O35137 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx4O35137 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Alx4O35137 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Alx4O35137 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.57■□□□□ 0.24
Alx4O35137 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx4O35137 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx4O35137 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.56■□□□□ 0.24
Alx4O35137 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Alx4O35137 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Alx4O35137 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.56■□□□□ 0.24
Alx4O35137 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx4O35137 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Alx4O35137 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Alx4O35137 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.55■□□□□ 0.24
Alx4O35137 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.55■□□□□ 0.24
Alx4O35137 Gm27801-201ENSMUST00000184174 223 ntBASIC16.55■□□□□ 0.24
Alx4O35137 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.55■□□□□ 0.24
Alx4O35137 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Alx4O35137 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Alx4O35137 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Alx4O35137 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.54■□□□□ 0.24
Alx4O35137 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Alx4O35137 Smad6-203ENSMUST00000179458 273 ntBASIC16.54■□□□□ 0.24
Alx4O35137 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.54■□□□□ 0.24
Alx4O35137 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.54■□□□□ 0.24
Alx4O35137 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.54■□□□□ 0.24
Alx4O35137 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.54■□□□□ 0.24
Alx4O35137 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx4O35137 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Gm12251-201ENSMUST00000117893 792 ntBASIC16.53■□□□□ 0.24
Alx4O35137 Gm11421-201ENSMUST00000122124 294 ntBASIC16.53■□□□□ 0.24
Alx4O35137 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.53■□□□□ 0.24
Alx4O35137 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Alx4O35137 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Alx4O35137 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.53■□□□□ 0.24
Alx4O35137 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx4O35137 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.52■□□□□ 0.24
Alx4O35137 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Alx4O35137 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.52■□□□□ 0.24
Alx4O35137 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.52■□□□□ 0.24
Alx4O35137 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Alx4O35137 Gm9847-201ENSMUST00000052528 599 ntBASIC16.52■□□□□ 0.24
Alx4O35137 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx4O35137 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Alx4O35137 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Alx4O35137 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms