Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr2jO08740 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr2jO08740 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr2jO08740 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr2jO08740 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Polr2jO08740 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Polr2jO08740 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Polr2jO08740 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.83■□□□□ 0.45
Polr2jO08740 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Polr2jO08740 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Polr2jO08740 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Polr2jO08740 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Polr2jO08740 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Polr2jO08740 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Polr2jO08740 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Polr2jO08740 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.83■□□□□ 0.44
Polr2jO08740 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr2jO08740 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.83■□□□□ 0.44
Polr2jO08740 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Polr2jO08740 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.83■□□□□ 0.44
Polr2jO08740 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr2jO08740 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.83■□□□□ 0.44
Polr2jO08740 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr2jO08740 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Polr2jO08740 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Polr2jO08740 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Polr2jO08740 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.82■□□□□ 0.44
Polr2jO08740 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Polr2jO08740 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.81■□□□□ 0.44
Polr2jO08740 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.81■□□□□ 0.44
Polr2jO08740 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Polr2jO08740 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.81■□□□□ 0.44
Polr2jO08740 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.81■□□□□ 0.44
Polr2jO08740 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Polr2jO08740 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2jO08740 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Polr2jO08740 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.8■□□□□ 0.44
Polr2jO08740 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.8■□□□□ 0.44
Polr2jO08740 Gm27801-201ENSMUST00000184174 223 ntBASIC17.8■□□□□ 0.44
Polr2jO08740 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.8■□□□□ 0.44
Polr2jO08740 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Polr2jO08740 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2jO08740 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Polr2jO08740 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2jO08740 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2jO08740 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2jO08740 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2jO08740 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Polr2jO08740 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.79■□□□□ 0.44
Polr2jO08740 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2jO08740 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.79■□□□□ 0.44
Polr2jO08740 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2jO08740 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Polr2jO08740 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Polr2jO08740 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.78■□□□□ 0.44
Polr2jO08740 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.78■□□□□ 0.44
Polr2jO08740 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2jO08740 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms