Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm4340L7N2C4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm4340L7N2C4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm4340L7N2C4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Gm4340L7N2C4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm4340L7N2C4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm4340L7N2C4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Gm2399-201ENSMUST00000104944 225 ntBASIC22.3■■□□□ 1.16
Gm4340L7N2C4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4340L7N2C4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.29■■□□□ 1.16
Gm4340L7N2C4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.29■■□□□ 1.16
Gm4340L7N2C4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm4340L7N2C4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm4340L7N2C4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gm4340L7N2C4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm4340L7N2C4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.28■■□□□ 1.16
Gm4340L7N2C4 Gm22325-201ENSMUST00000158904 308 ntBASIC22.28■■□□□ 1.16
Gm4340L7N2C4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm4340L7N2C4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Gm4340L7N2C4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm4340L7N2C4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm4340L7N2C4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Gm10812-201ENSMUST00000099864 546 ntBASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm4340L7N2C4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm4340L7N2C4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm4340L7N2C4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm4340L7N2C4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm4340L7N2C4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms