Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
B020004C17RikJ3QP07 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
B020004C17RikJ3QP07 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Gm18025-201ENSMUST00000221733 862 ntBASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
B020004C17RikJ3QP07 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Gm15375-201ENSMUST00000119510 849 ntBASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
B020004C17RikJ3QP07 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
B020004C17RikJ3QP07 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
B020004C17RikJ3QP07 Gm38285-201ENSMUST00000192928 922 ntBASIC20.91■□□□□ 0.94
B020004C17RikJ3QP07 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.91■□□□□ 0.94
B020004C17RikJ3QP07 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
B020004C17RikJ3QP07 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
B020004C17RikJ3QP07 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
B020004C17RikJ3QP07 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
B020004C17RikJ3QP07 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
B020004C17RikJ3QP07 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
B020004C17RikJ3QP07 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
B020004C17RikJ3QP07 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.89■□□□□ 0.94
B020004C17RikJ3QP07 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
B020004C17RikJ3QP07 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Gm30025-201ENSMUST00000218555 728 ntBASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Odf3b-204ENSMUST00000227834 930 ntBASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
B020004C17RikJ3QP07 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
B020004C17RikJ3QP07 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.87■□□□□ 0.93
B020004C17RikJ3QP07 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms