Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh1F7BJK1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh1F7BJK1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh1F7BJK1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh1F7BJK1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh1F7BJK1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh1F7BJK1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Gm7860-201ENSMUST00000121190 879 ntBASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh1F7BJK1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh1F7BJK1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Pcdh1F7BJK1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh1F7BJK1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Gm12251-201ENSMUST00000117893 792 ntBASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh1F7BJK1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh1F7BJK1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh1F7BJK1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh1F7BJK1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms