Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh11xF6ZNL5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh11xF6ZNL5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Gm29257-201ENSMUST00000186115 639 ntBASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh11xF6ZNL5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh11xF6ZNL5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdh11xF6ZNL5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh11xF6ZNL5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.58■□□□□ 0.88
Pcdh11xF6ZNL5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh11xF6ZNL5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh11xF6ZNL5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdh11xF6ZNL5 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.55■□□□□ 0.88
Pcdh11xF6ZNL5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh11xF6ZNL5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms