Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TprF6ZDS4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.08■□□□□ 0.33
TprF6ZDS4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TprF6ZDS4 Gm13158-201ENSMUST00000122007 736 ntBASIC17.08■□□□□ 0.33
TprF6ZDS4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TprF6ZDS4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TprF6ZDS4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TprF6ZDS4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TprF6ZDS4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TprF6ZDS4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.08■□□□□ 0.32
TprF6ZDS4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TprF6ZDS4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TprF6ZDS4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TprF6ZDS4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TprF6ZDS4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TprF6ZDS4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.06■□□□□ 0.32
TprF6ZDS4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.06■□□□□ 0.32
TprF6ZDS4 Gm18666-201ENSMUST00000190039 958 ntBASIC17.06■□□□□ 0.32
TprF6ZDS4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TprF6ZDS4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TprF6ZDS4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.05■□□□□ 0.32
TprF6ZDS4 Gm17971-201ENSMUST00000190239 806 ntBASIC17.05■□□□□ 0.32
TprF6ZDS4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TprF6ZDS4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TprF6ZDS4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TprF6ZDS4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TprF6ZDS4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TprF6ZDS4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.04■□□□□ 0.32
TprF6ZDS4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TprF6ZDS4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TprF6ZDS4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TprF6ZDS4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.03■□□□□ 0.32
TprF6ZDS4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.03■□□□□ 0.32
TprF6ZDS4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TprF6ZDS4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TprF6ZDS4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TprF6ZDS4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TprF6ZDS4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TprF6ZDS4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TprF6ZDS4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TprF6ZDS4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TprF6ZDS4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TprF6ZDS4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TprF6ZDS4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.02■□□□□ 0.32
TprF6ZDS4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TprF6ZDS4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TprF6ZDS4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.02■□□□□ 0.32
TprF6ZDS4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TprF6ZDS4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TprF6ZDS4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TprF6ZDS4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TprF6ZDS4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.02■□□□□ 0.31
TprF6ZDS4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TprF6ZDS4 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.01■□□□□ 0.31
TprF6ZDS4 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms