Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Gm27405-201ENSMUST00000184201 112 ntBASIC19.67■□□□□ 0.74
Rfx8D3YU81 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx8D3YU81 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx8D3YU81 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx8D3YU81 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Rfx8D3YU81 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfx8D3YU81 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfx8D3YU81 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.64■□□□□ 0.73
Rfx8D3YU81 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.64■□□□□ 0.73
Rfx8D3YU81 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rfx8D3YU81 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Rfx8D3YU81 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.62■□□□□ 0.73
Rfx8D3YU81 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx8D3YU81 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.61■□□□□ 0.73
Rfx8D3YU81 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Gm7291-201ENSMUST00000199147 382 ntBASIC19.61■□□□□ 0.73
Rfx8D3YU81 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx8D3YU81 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rfx8D3YU81 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.6■□□□□ 0.73
Rfx8D3YU81 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms