Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
Rrn3B2RS91 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.65■□□□□ 0.58
Rrn3B2RS91 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrn3B2RS91 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rrn3B2RS91 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rrn3B2RS91 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Rrn3B2RS91 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rrn3B2RS91 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Gm10602-201ENSMUST00000098239 609 ntBASIC18.64■□□□□ 0.57
Rrn3B2RS91 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrn3B2RS91 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.63■□□□□ 0.57
Rrn3B2RS91 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrn3B2RS91 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Nespas-201ENSMUST00000143738 1083 ntBASIC18.62■□□□□ 0.57
Rrn3B2RS91 Mir5133-201ENSMUST00000174955 77 ntBASIC18.62■□□□□ 0.57
Rrn3B2RS91 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Rrn3B2RS91 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.61■□□□□ 0.57
Rrn3B2RS91 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rrn3B2RS91 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rrn3B2RS91 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Gm6365-201ENSMUST00000054711 744 ntBASIC18.6■□□□□ 0.57
Rrn3B2RS91 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrn3B2RS91 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms