Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Herc3A6H6S0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.58■□□□□ 0.88
Herc3A6H6S0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Herc3A6H6S0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc3A6H6S0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.57■□□□□ 0.88
Herc3A6H6S0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc3A6H6S0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Gm42778-201ENSMUST00000199644 553 ntBASIC20.56■□□□□ 0.88
Herc3A6H6S0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc3A6H6S0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.55■□□□□ 0.88
Herc3A6H6S0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc3A6H6S0 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.54■□□□□ 0.88
Herc3A6H6S0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Herc3A6H6S0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herc3A6H6S0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.54■□□□□ 0.88
Herc3A6H6S0 Gm10033-202ENSMUST00000211874 928 ntBASIC20.54■□□□□ 0.88
Herc3A6H6S0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Herc3A6H6S0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herc3A6H6S0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herc3A6H6S0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
Herc3A6H6S0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.53■□□□□ 0.88
Herc3A6H6S0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.53■□□□□ 0.88
Herc3A6H6S0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Herc3A6H6S0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Herc3A6H6S0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.52■□□□□ 0.87
Herc3A6H6S0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc3A6H6S0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Herc3A6H6S0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Herc3A6H6S0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Herc3A6H6S0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.5■□□□□ 0.87
Herc3A6H6S0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Herc3A6H6S0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms