Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5640A3KG49 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5640A3KG49 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5640A3KG49 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5640A3KG49 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5640A3KG49 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Gm5640A3KG49 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5640A3KG49 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.86■□□□□ 0.61
Gm5640A3KG49 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5640A3KG49 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5640A3KG49 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.84■□□□□ 0.61
Gm5640A3KG49 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.84■□□□□ 0.61
Gm5640A3KG49 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5640A3KG49 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5640A3KG49 Fst-202ENSMUST00000223640 2612 ntBASIC18.83■□□□□ 0.61
Gm5640A3KG49 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5640A3KG49 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm5640A3KG49 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5640A3KG49 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Gm5640A3KG49 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5640A3KG49 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Gm5640A3KG49 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.82■□□□□ 0.6
Gm5640A3KG49 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm5640A3KG49 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm5640A3KG49 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Gm5640A3KG49 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm5640A3KG49 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5640A3KG49 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms