Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Rarb-207ENSMUST00000225921 2756 ntBASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc112A0AUP1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc112A0AUP1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc112A0AUP1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Gm45417-201ENSMUST00000209533 758 ntBASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc112A0AUP1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Gm38205-201ENSMUST00000192243 258 ntBASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc112A0AUP1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc112A0AUP1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc112A0AUP1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms