Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lnp1A0A1B0GSK3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm10493-201ENSMUST00000097270 612 ntBASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lnp1A0A1B0GSK3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm13234-201ENSMUST00000120010 747 ntBASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.47■□□□□ 0.07
Lnp1A0A1B0GSK3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm13146-201ENSMUST00000118508 780 ntBASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.46■□□□□ 0.07
Lnp1A0A1B0GSK3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lnp1A0A1B0GSK3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lnp1A0A1B0GSK3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lnp1A0A1B0GSK3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lnp1A0A1B0GSK3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lnp1A0A1B0GSK3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms