Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc194A0A140LIT1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.52■□□□□ 0.55
Ccdc194A0A140LIT1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc194A0A140LIT1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc194A0A140LIT1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc194A0A140LIT1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc194A0A140LIT1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc194A0A140LIT1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc194A0A140LIT1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc194A0A140LIT1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Gm43017-201ENSMUST00000198296 752 ntBASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc194A0A140LIT1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.48■□□□□ 0.55
Ccdc194A0A140LIT1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc194A0A140LIT1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc194A0A140LIT1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ccdc194A0A140LIT1 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.46■□□□□ 0.54
Ccdc194A0A140LIT1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc194A0A140LIT1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms