Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb8A0A140LI48 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhgb8A0A140LI48 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb8A0A140LI48 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb8A0A140LI48 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb8A0A140LI48 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb8A0A140LI48 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb8A0A140LI48 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb8A0A140LI48 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm5874-201ENSMUST00000096101 508 ntBASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm10493-201ENSMUST00000097270 612 ntBASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb8A0A140LI48 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pcdhgb8A0A140LI48 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb8A0A140LI48 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm11421-201ENSMUST00000122124 294 ntBASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb8A0A140LI48 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.72■□□□□ 0.27
Pcdhgb8A0A140LI48 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms