Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Etf1-202ENSMUST00000180351 108 ntBASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm7417-201ENSMUST00000192950 473 ntBASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
Trav3n-3A0A0G2JEM0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms