Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv16-1A0A0A6YW39 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.17■□□□□ 0.34
Ighv16-1A0A0A6YW39 Gm29257-201ENSMUST00000186115 639 ntBASIC17.17■□□□□ 0.34
Ighv16-1A0A0A6YW39 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv16-1A0A0A6YW39 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ighv16-1A0A0A6YW39 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv16-1A0A0A6YW39 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv16-1A0A0A6YW39 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Gm10602-201ENSMUST00000098239 609 ntBASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.15■□□□□ 0.34
Ighv16-1A0A0A6YW39 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ighv16-1A0A0A6YW39 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ighv16-1A0A0A6YW39 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Mir5133-201ENSMUST00000174955 77 ntBASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Ighv16-1A0A0A6YW39 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv16-1A0A0A6YW39 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Gm12933-201ENSMUST00000120203 872 ntBASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv16-1A0A0A6YW39 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms