Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-9A0A0A6YW37 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gm40848-201ENSMUST00000221998 324 ntBASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.01□□□□□ -0.17
Ighv1-9A0A0A6YW37 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gm45417-201ENSMUST00000209533 758 ntBASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-9A0A0A6YW37 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-9A0A0A6YW37 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gm43017-201ENSMUST00000198296 752 ntBASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-9A0A0A6YW37 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-9A0A0A6YW37 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-9A0A0A6YW37 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.96□□□□□ -0.17
Ighv1-9A0A0A6YW37 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-9A0A0A6YW37 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-9A0A0A6YW37 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-9A0A0A6YW37 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms