Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-4-dv7A0A075B6C2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms