Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-5A0A075B6B9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-5A0A075B6B9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-5A0A075B6B9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-5A0A075B6B9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.02■□□□□ -0
Trav6d-5A0A075B6B9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-5A0A075B6B9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm22238-201ENSMUST00000175222 88 ntBASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-5A0A075B6B9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Fcho2-208ENSMUST00000224992 2964 ntBASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-5A0A075B6B9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Fst-202ENSMUST00000223640 2612 ntBASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-5A0A075B6B9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm8969-201ENSMUST00000199694 526 ntBASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-5A0A075B6B9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-5A0A075B6B9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms