Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Gm14117-201ENSMUST00000122417 843 ntBASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-2-dv6-2A0A075B650 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms