Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trav16nA0A075B634 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav16nA0A075B634 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Serp2-204ENSMUST00000228055 705 ntBASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav16nA0A075B634 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav16nA0A075B634 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16nA0A075B634 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.06□□□□□ -0.16
Trav16nA0A075B634 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16nA0A075B634 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav16nA0A075B634 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16nA0A075B634 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav16nA0A075B634 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms