Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Mir5133-201ENSMUST00000174955 77 ntBASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12n-2A0A075B626 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12n-2A0A075B626 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Gm6211-202ENSMUST00000167849 925 ntBASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12n-2A0A075B626 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav12n-2A0A075B626 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Golph3-205ENSMUST00000228671 2842 ntBASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav12n-2A0A075B626 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav12n-2A0A075B626 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12n-2A0A075B626 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12n-2A0A075B626 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav12n-2A0A075B626 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12n-2A0A075B626 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav12n-2A0A075B626 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12n-2A0A075B626 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms