Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Rarb-207ENSMUST00000225921 2756 ntBASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Spcs1-204ENSMUST00000226782 949 ntBASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms