Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-1A0A075B606 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Nespas-201ENSMUST00000143738 1083 ntBASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Gm6420-201ENSMUST00000193885 723 ntBASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-1A0A075B606 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13d-1A0A075B606 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13d-1A0A075B606 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-1A0A075B606 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav13d-1A0A075B606 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.56□□□□□ -0.24
Trav13d-1A0A075B606 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms