Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm14117-201ENSMUST00000122417 843 ntBASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-1A0A075B5Z8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-1A0A075B5Z8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6-1A0A075B5Z8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-1A0A075B5Z8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms