Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm28653-201ENSMUST00000185494 5276 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm23701-201ENSMUST00000103893 110 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm26143-201ENSMUST00000104480 108 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm13921-201ENSMUST00000119411 463 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm11955-201ENSMUST00000119801 470 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm15103-201ENSMUST00000119893 871 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm13586-201ENSMUST00000121784 464 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm27542-201ENSMUST00000184184 256 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm9127-201ENSMUST00000188041 985 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm18348-201ENSMUST00000191227 820 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm27680-202ENSMUST00000199221 807 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm43840-201ENSMUST00000199444 484 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm9652-201ENSMUST00000209345 163 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm46317-201ENSMUST00000221103 393 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 AC140368.1-202ENSMUST00000226131 658 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm24613-201ENSMUST00000083266 130 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm24696-201ENSMUST00000083878 134 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm11868-201ENSMUST00000121594 1478 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm10302-201ENSMUST00000174433 3535 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.83□□□□□ -0.84
RtcbQ99LF4 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 C79130-201ENSMUST00000199610 4296 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm25757-201ENSMUST00000103986 123 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm13033-201ENSMUST00000117591 1057 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm12656-201ENSMUST00000118149 577 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm11689-201ENSMUST00000120766 302 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm14957-201ENSMUST00000121069 817 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 n-R5s47-201ENSMUST00000122516 119 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm26179-201ENSMUST00000177723 132 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Mir6409-201ENSMUST00000184957 92 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm4850-201ENSMUST00000185684 559 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Trav22-201ENSMUST00000198117 346 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC9.82□□□□□ -0.84
RtcbQ99LF4 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm45198-201ENSMUST00000206796 591 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm45509-201ENSMUST00000209624 1229 ntBASIC9.82□□□□□ -0.84
RtcbQ99LF4 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms