Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm8689-201ENSMUST00000218709 712 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm46379-201ENSMUST00000222551 265 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 AC160930.2-201ENSMUST00000226608 303 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 AC147096.1-201ENSMUST00000227648 352 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm14891-201ENSMUST00000117378 596 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm8662-201ENSMUST00000118644 574 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm11765-201ENSMUST00000121173 1205 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Mir7230-201ENSMUST00000195977 56 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm18995-201ENSMUST00000202981 520 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 AC122774.1-201ENSMUST00000227703 762 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 AC122877.1-201ENSMUST00000228873 218 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Olfr120-201ENSMUST00000077498 993 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Gm12904-201ENSMUST00000117451 1399 ntBASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nup35Q8R4R6 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Gm8204-201ENSMUST00000185696 2144 ntBASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup35Q8R4R6 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms