Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm21941-201ENSMUST00000221121 562 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm37520-201ENSMUST00000194883 2672 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm23946-201ENSMUST00000104423 197 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm5761-201ENSMUST00000119238 834 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm12959-201ENSMUST00000119396 403 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm14749-201ENSMUST00000121269 333 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm37339-201ENSMUST00000194142 392 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 AC207128.2-202ENSMUST00000224010 808 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 CT009733.1-202ENSMUST00000224941 441 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 AC154595.1-201ENSMUST00000225533 1059 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 AC124715.2-201ENSMUST00000226762 617 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm10155-201ENSMUST00000084598 483 ntBASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Nup88Q8CEC0 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm24373-201ENSMUST00000104393 132 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Mir1932-201ENSMUST00000157390 90 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm42464-201ENSMUST00000196717 417 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm42938-201ENSMUST00000198414 1072 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Klra13-ps-203ENSMUST00000204367 850 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm18207-201ENSMUST00000205486 526 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm44743-201ENSMUST00000209062 386 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms