Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Dgkh-206ENSMUST00000228362 3308 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm15778-201ENSMUST00000118469 608 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm12959-201ENSMUST00000119396 403 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm13525-201ENSMUST00000120607 478 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm16276-201ENSMUST00000131218 262 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Mir1983-201ENSMUST00000157523 132 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm23392-201ENSMUST00000157580 113 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm24824-201ENSMUST00000175097 78 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm43558-201ENSMUST00000200155 210 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm45900-201ENSMUST00000211879 409 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC10.84□□□□□ -0.67
Usp47Q8BY87 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC10.84□□□□□ -0.67
Usp47Q8BY87 AC154382.1-201ENSMUST00000220958 1282 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 AC122937.2-201ENSMUST00000228258 1051 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 BC085271-201ENSMUST00000191852 1487 ntBASIC10.84□□□□□ -0.67
Usp47Q8BY87 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp47Q8BY87 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Usp47Q8BY87 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gm37067-201ENSMUST00000195730 1628 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gm5406-201ENSMUST00000120054 766 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gm16330-201ENSMUST00000128324 297 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gm25692-201ENSMUST00000175444 125 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gm44902-201ENSMUST00000206177 805 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 AC192091.1-201ENSMUST00000218668 439 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 CT030260.1-201ENSMUST00000223243 442 ntBASIC10.83□□□□□ -0.68
Usp47Q8BY87 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Usp47Q8BY87 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm42678-201ENSMUST00000197163 2221 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm38288-201ENSMUST00000195330 1320 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm25593-201ENSMUST00000102272 96 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm24300-201ENSMUST00000177809 109 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm24017-201ENSMUST00000178726 109 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm23952-201ENSMUST00000179380 109 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm38337-201ENSMUST00000193986 599 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms