Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 AC168056.4-201ENSMUST00000223835 2567 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 AC101875.1-201ENSMUST00000222666 2223 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm6640-201ENSMUST00000120629 1587 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm16056-201ENSMUST00000119293 135 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Mir6403-201ENSMUST00000185007 129 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm17965-201ENSMUST00000193904 517 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm4525-201ENSMUST00000198831 254 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 AC159205.2-201ENSMUST00000223759 816 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 AC155270.1-201ENSMUST00000221626 4028 ntBASIC10.81□□□□□ -0.68
Usp54Q8BL06 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Gm16284-201ENSMUST00000140995 400 ntBASIC10.81□□□□□ -0.68
Usp54Q8BL06 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Gm26183-201ENSMUST00000157685 139 ntBASIC10.81□□□□□ -0.68
Usp54Q8BL06 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC10.81□□□□□ -0.68
Usp54Q8BL06 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Gm28649-201ENSMUST00000189153 1581 ntBASIC10.81□□□□□ -0.68
Usp54Q8BL06 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Usp54Q8BL06 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm12346-201ENSMUST00000121455 2255 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm22707-201ENSMUST00000103834 110 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm16221-201ENSMUST00000117331 393 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm13900-201ENSMUST00000119402 498 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm11895-201ENSMUST00000122165 467 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm25989-201ENSMUST00000158761 133 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm17022-201ENSMUST00000166415 922 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 n-R5s29-201ENSMUST00000082836 119 ntBASIC10.8□□□□□ -0.68
Usp54Q8BL06 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp54Q8BL06 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms