Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Trdv2-1-201ENSMUST00000103677 345 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm23485-201ENSMUST00000104181 155 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm11833-201ENSMUST00000118393 853 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm8832-201ENSMUST00000119890 395 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm2541-201ENSMUST00000161209 711 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Olfr126-201ENSMUST00000174139 960 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm21013-201ENSMUST00000184952 1201 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm38051-201ENSMUST00000193740 433 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm17530-201ENSMUST00000194336 472 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 AC146596.1-201ENSMUST00000223507 223 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 AC162940.1-201ENSMUST00000224745 1167 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CtifQ6PEE2 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.21□□□□□ -1.1
CtifQ6PEE2 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm43225-201ENSMUST00000201381 1439 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm14519-201ENSMUST00000118490 312 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm15464-201ENSMUST00000118718 431 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm15937-201ENSMUST00000120727 1235 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm8172-201ENSMUST00000120762 750 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 2210408F21Rik-205ENSMUST00000138606 482 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm13402-201ENSMUST00000153600 424 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm24039-201ENSMUST00000157878 132 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm23220-201ENSMUST00000158115 137 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm25082-201ENSMUST00000177296 255 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm30932-201ENSMUST00000191893 274 ntTSL 3 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm37689-201ENSMUST00000193139 275 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm42698-201ENSMUST00000197790 762 ntBASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm42538-202ENSMUST00000199431 358 ntTSL 3 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm44790-201ENSMUST00000204137 798 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CtifQ6PEE2 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CtifQ6PEE2 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms