Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm28356-202ENSMUST00000187566 858 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm37700-201ENSMUST00000192617 965 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm18382-201ENSMUST00000194394 582 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm43590-201ENSMUST00000195987 387 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm18747-201ENSMUST00000198129 648 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm42573-201ENSMUST00000202327 478 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm19596-201ENSMUST00000203685 739 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 AC163041.1-201ENSMUST00000221984 133 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm11870-201ENSMUST00000119255 1322 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Nkx2-3P97334 CT025645.1-201ENSMUST00000222760 4322 ntBASIC10.24□□□□□ -0.77
Nkx2-3P97334 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx2-3P97334 Gm37483-201ENSMUST00000194382 1484 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 AC120163.1-201ENSMUST00000228618 1680 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Mup-ps14-201ENSMUST00000118437 532 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Mup-ps10-201ENSMUST00000119626 556 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm28894-201ENSMUST00000185214 615 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm17867-201ENSMUST00000188981 391 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm37632-201ENSMUST00000191811 1142 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm37369-201ENSMUST00000194179 615 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm43664-201ENSMUST00000196038 734 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm8921-201ENSMUST00000204306 649 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm45247-201ENSMUST00000210757 309 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm8637-201ENSMUST00000212919 1085 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm18226-201ENSMUST00000215261 521 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm18503-201ENSMUST00000220340 728 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 AC130673.2-201ENSMUST00000228091 797 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Mir146b-201ENSMUST00000093619 109 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Lage3-203ENSMUST00000114153 1997 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm42895-201ENSMUST00000200761 2996 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Gm28497-201ENSMUST00000189646 3029 ntBASIC10.23□□□□□ -0.77
Nkx2-3P97334 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-3P97334 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Synpo2-201ENSMUST00000051443 3719 ntBASIC10.22□□□□□ -0.77
Nkx2-3P97334 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Gm37995-201ENSMUST00000194958 1714 ntBASIC10.22□□□□□ -0.77
Nkx2-3P97334 AC131029.1-201ENSMUST00000226391 2929 ntBASIC10.22□□□□□ -0.77
Nkx2-3P97334 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-3P97334 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms