Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm44001-201ENSMUST00000203158 3773 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 AC107452.3-201ENSMUST00000228807 1308 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC10.38□□□□□ -0.75
Nphp4P59240 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nphp4P59240 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nphp4P59240 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm14279-201ENSMUST00000117142 332 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Gm10243-201ENSMUST00000117571 333 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Gm7369-201ENSMUST00000192738 936 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm17965-201ENSMUST00000193904 517 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm44147-201ENSMUST00000204658 94 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm45900-201ENSMUST00000211879 409 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Gm46311-201ENSMUST00000217971 203 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 CT030166.4-201ENSMUST00000220640 404 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 AC133598.4-201ENSMUST00000224577 454 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm10247-201ENSMUST00000090395 333 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nphp4P59240 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nphp4P59240 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nphp4P59240 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm37956-201ENSMUST00000195208 2010 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Gm44116-201ENSMUST00000204269 1525 ntBASIC10.38□□□□□ -0.75
Nphp4P59240 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nphp4P59240 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC10.37□□□□□ -0.75
Nphp4P59240 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nphp4P59240 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nphp4P59240 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 CT010505.3-201ENSMUST00000227835 1651 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Gm43323-201ENSMUST00000202328 4258 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Gm7265-201ENSMUST00000192735 3502 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nphp4P59240 AC164437.4-204ENSMUST00000227169 4024 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nphp4P59240 Gm15842-201ENSMUST00000120513 618 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC10.37□□□□□ -0.75
Nphp4P59240 Gm9286-201ENSMUST00000173586 508 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Pea15b-201ENSMUST00000182806 387 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Gm27684-201ENSMUST00000183778 80 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Mir6403-201ENSMUST00000185007 129 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Gm29008-201ENSMUST00000189387 298 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC10.37□□□□□ -0.75
Nphp4P59240 Gm44112-201ENSMUST00000204787 372 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 AC152922.1-201ENSMUST00000216518 1232 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nphp4P59240 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Gm37139-201ENSMUST00000192134 4419 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nphp4P59240 Gm15903-202ENSMUST00000199631 3518 ntBASIC10.37□□□□□ -0.75
Nphp4P59240 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nphp4P59240 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Gm37159-201ENSMUST00000192720 3605 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Gm20236-201ENSMUST00000193037 4540 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 Gm37094-201ENSMUST00000193352 4540 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms