Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm12258-201ENSMUST00000093768 2524 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 AC168056.4-201ENSMUST00000223835 2567 ntBASIC9.81□□□□□ -0.84
Msh6P54276 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm16523-201ENSMUST00000121253 592 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Gm12634-201ENSMUST00000122157 992 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm25164-201ENSMUST00000158908 116 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Gm6264-201ENSMUST00000160802 624 ntBASIC9.81□□□□□ -0.84
Msh6P54276 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Gm29562-201ENSMUST00000190113 904 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Gm43287-201ENSMUST00000197747 600 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Gm43906-201ENSMUST00000203194 906 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Gm25926-201ENSMUST00000082899 160 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 AC165260.6-205ENSMUST00000224190 9762 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm43684-201ENSMUST00000199279 6573 ntBASIC9.81□□□□□ -0.84
Msh6P54276 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.81□□□□□ -0.84
Msh6P54276 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.81□□□□□ -0.84
Msh6P54276 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Msh6P54276 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Msh6P54276 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Msh6P54276 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.8□□□□□ -0.84
Msh6P54276 Gm43775-201ENSMUST00000201019 3395 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Gm22927-201ENSMUST00000104268 131 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Gm14824-201ENSMUST00000119421 737 ntBASIC9.8□□□□□ -0.84
Msh6P54276 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC9.8□□□□□ -0.84
Msh6P54276 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Gm6472-202ENSMUST00000187973 582 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Gm42424-201ENSMUST00000198319 376 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC9.8□□□□□ -0.84
Msh6P54276 Gm44590-201ENSMUST00000206161 391 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Msh6P54276 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Msh6P54276 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Msh6P54276 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Gm44895-201ENSMUST00000206670 1538 ntBASIC9.8□□□□□ -0.84
Msh6P54276 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Msh6P54276 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Msh6P54276 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Msh6P54276 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Msh6P54276 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Msh6P54276 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm43323-201ENSMUST00000202328 4258 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms