Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm43765-201ENSMUST00000196303 893 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm38433-201ENSMUST00000196978 856 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm9023-201ENSMUST00000198408 1038 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm43116-201ENSMUST00000199789 195 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm5885-202ENSMUST00000203357 528 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm44856-201ENSMUST00000206639 304 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 AC159819.1-201ENSMUST00000213911 328 ntBASIC8.42□□□□□ -1.06
Sox1P53783 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm46191-201ENSMUST00000218899 433 ntBASIC8.42□□□□□ -1.06
Sox1P53783 AC153526.1-201ENSMUST00000219750 190 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.42□□□□□ -1.06
Sox1P53783 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.42□□□□□ -1.06
Sox1P53783 AC165437.1-201ENSMUST00000228640 536 ntBASIC8.42□□□□□ -1.06
Sox1P53783 H2-M1-201ENSMUST00000041662 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Zmym1-203ENSMUST00000106102 3852 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Prokr1-201ENSMUST00000050887 4075 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Gm42736-201ENSMUST00000200723 1353 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Sox1P53783 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Mns1-201ENSMUST00000034746 5250 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm36325-201ENSMUST00000210487 2885 ntTSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC8.42□□□□□ -1.06
Sox1P53783 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Fam19a3-201ENSMUST00000139783 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Plp1-202ENSMUST00000113085 2540 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.41□□□□□ -1.06
Sox1P53783 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Lin7a-201ENSMUST00000020057 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gm37957-201ENSMUST00000192182 2303 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm7328-201ENSMUST00000211123 2225 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sox1P53783 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Nbr1-205ENSMUST00000107212 4168 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gm24142-201ENSMUST00000101960 107 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm24462-201ENSMUST00000102430 106 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm26144-201ENSMUST00000104475 132 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm14728-201ENSMUST00000122196 492 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gm25372-201ENSMUST00000158161 255 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Traj54-201ENSMUST00000165071 54 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm7991-201ENSMUST00000168668 591 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Mir6908-201ENSMUST00000184056 63 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm6749-201ENSMUST00000203838 405 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gm18012-201ENSMUST00000204558 773 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm18973-201ENSMUST00000205814 511 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm45240-201ENSMUST00000211437 674 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.41□□□□□ -1.06
Sox1P53783 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.41□□□□□ -1.06
Sox1P53783 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm21941-201ENSMUST00000221121 562 ntBASIC8.41□□□□□ -1.06
Sox1P53783 AC133203.1-201ENSMUST00000228241 301 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Apoh-201ENSMUST00000000049 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sox1P53783 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sox1P53783 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Sox1P53783 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 AC115891.3-201ENSMUST00000219161 2472 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gpr152-201ENSMUST00000096338 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms