Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm37901-201ENSMUST00000195107 514 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm43836-201ENSMUST00000196532 381 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm42634-201ENSMUST00000197362 381 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gabra4-203ENSMUST00000198138 440 ntTSL 2 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm18635-201ENSMUST00000199020 1060 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.08□□□□□ -1.12
Hoxd9P28357 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.08□□□□□ -1.12
Hoxd9P28357 1700012B07Rik-201ENSMUST00000020941 919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm45238-201ENSMUST00000210204 517 ntTSL 2 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm19161-201ENSMUST00000217958 737 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 CT025603.3-201ENSMUST00000224031 419 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 AC116596.2-201ENSMUST00000226642 526 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Zdhhc22-201ENSMUST00000095521 792 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm4275-205ENSMUST00000212624 1436 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm37120-201ENSMUST00000193350 5959 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Hoxd9P28357 A230059L01Rik-201ENSMUST00000126596 2813 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Tnf-202ENSMUST00000167924 1462 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm20679-201ENSMUST00000177285 1402 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 AC102431.1-201ENSMUST00000223773 1449 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Snord70-201ENSMUST00000104157 87 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm25803-201ENSMUST00000104419 131 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm14682-201ENSMUST00000117977 524 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm12875-201ENSMUST00000118745 344 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm5393-201ENSMUST00000119106 272 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm14911-201ENSMUST00000120803 989 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Dlx1as-203ENSMUST00000140271 700 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Scamp1-204ENSMUST00000153558 1255 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm29474-201ENSMUST00000187688 379 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm28396-201ENSMUST00000190309 379 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Hoxd9P28357 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm42628-201ENSMUST00000198498 764 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm2566-201ENSMUST00000201267 431 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm45344-201ENSMUST00000211610 341 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Gm5080-201ENSMUST00000220341 743 ntBASIC8.07□□□□□ -1.12
Hoxd9P28357 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxd9P28357 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Hoxd9P28357 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms